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LOCUS KT351544 1071 bp DNA linear VRL 21-DEC-2015

发布时间：2026/4/10 15:43:26 阅读次数：7

LOCUS       KT351544                1071 bp    DNA     linear   VRL 21-DEC-2015
DEFINITION Human T-cell leukemia virus type I isolate BRSP90473-14 tax protein
            (tax) gene, partial cds.
ACCESSION   KT351544
VERSION     KT351544.1
KEYWORDS    .
SOURCE      Human T-cell leukemia virus type I
ORGANISM Human T-cell leukemia virus type I
            Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes;
            Ortervirales; Retroviridae; Orthoretrovirinae; Deltaretrovirus;
            Primate T-lymphotropic virus 1.
REFERENCE   1 (bases 1 to 1071)
AUTHORS   Costa,N.A., Campos,K.R., Teixeira,S.A., Magri,M.C. and
            Caterino-de-Araujo,A.
TITLE     Surveillance of HTLV-1 and HTLV-2 subtypes among HIV-1-coinfected
            patients from Sao Paulo, Brazil
JOURNAL   Unpublished
REFERENCE   2 (bases 1 to 1071)
AUTHORS   Costa,N.A., Campos,K.R., Teixeira,S.A., Magri,M.C. and
            Caterino-de-Araujo,A.
TITLE     Direct Submission
JOURNAL   Submitted (22-JUL-2015) Dept of Immunology, Instituto Adolfo Lutz,
            Av Dr Arnaldo 355, 11 andar, Sao Paulo, Sao Paulo 01246-902, BrazilCOMMENT     ##Assembly-Data-START##
            Sequencing Technology :: Sanger dideoxy sequencing
            ##Assembly-Data-END##FEATURES             Location/Qualifiers     source          1..1071
                     /organism="Human T-cell leukemia virus type I"
                     /proviral
                     /mol_type="genomic DNA"
                     /isolate="BRSP90473-14"
                     /isolation_source="AIDS patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:11908"
                     /country="Brazil: Sao Paulo"
                     /collection_date="17-Nov-2014"     gene            <1..>1071
                     /gene="tax"     CDS             <1..>1071
                     /gene="tax"
                     /codon_start=1
                     /product="tax protein"
                     /protein_id="ALT07903.1"
                     /translation="PCLLSAHFPGFGQSLLFGYPVYVFGDCVQGDWCPISGGLCSARL
                     HRHALLATCPEHQITWDPIDGRVIGSALQFLIPRLPSFPTQRTSKTLKVLTPPITHTT
                     PNIPPSFLQAMRKYSPFRNGYMEPTLGQHLPTLSFPDPGLRPQNLYTLWGGSVVCMYL
                     YQLSPPITWPLLPHVIFCHPGQLGAFLTNVPYKRIEELLYKISLTTGALIILPEDCLP
                     TTLFQPVRAPVTLTAWQNGLLPFHSTLTTPGLIWTFTDGTPMISGPCPKDGQPSLVLQ
                     SSSFIFHKFQTKAYHPSFLLSHGLIQYSSFHNLHLLFEEYTNIPISLLFNEKEADDND
                     HEPQISPGGLEPPSEKHFRETEV"ORIGIN              1 ccatgcttat tatcagccca cttcccaggg tttggacaga gtcttctttt cggataccca
       61 gtctacgtgt ttggagactg tgtacaaggc gattggtgcc ccatctctgg gggactatgt
      121 tcggcccgcc tacatcgtca cgccctactg gccacctgtc cagagcatca gatcacctgg
      181 gaccccatcg atggacgcgt tatcggctca gctctacagt tccttatccc tcgactcccc
      241 tccttcccca cccagagaac ctctaagacc ctcaaggtcc ttaccccgcc aatcactcat
      301 acaaccccca acattccacc ctccttcctc caggccatgc gcaaatactc ccccttccga
      361 aatggataca tggaacccac ccttgggcag cacctcccaa ccctgtcttt tccagacccc
      421 ggactccggc cccaaaacct gtacaccctc tggggaggct ccgttgtctg catgtacctc
      481 taccagcttt ccccccccat cacctggccc ctcctgcccc acgtgatttt ttgccacccc
      541 ggccagctcg gggccttcct caccaatgtt ccctacaagc gaatagaaga actcctctat
      601 aaaatctccc ttaccacagg ggccctaata attctacccg aagattgttt gcccaccacc
      661 cttttccagc ctgttagggc acccgtcacg ctaacagcct ggcaaaacgg cctccttccg
      721 ttccactcaa ccctcaccac tccaggcctt atttggacat ttaccgatgg cacgcctatg
      781 atttccgggc cctgccctaa agatggccag ccatctttag tactacagtc ctcctccttt
      841 atatttcaca aatttcaaac caaggcctac cacccctcat ttctactctc gcacggcctc
      901 atacagtact cttcctttca taatttacat ctcctgtttg aagaatacac caacatcccc
      961 atttctctac tttttaacga aaaagaggca gatgacaatg accatgagcc ccaaatatcc
     1021 cccgggggct tagagcctcc cagtgaaaaa catttccgcg aaacagaagt c
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